Welcome to ColiCoords’ documentation!

Contents:

• Installation
• Introduction
  • Using ColiCoords
  • Plotting radial distributions
• Batch Processing
  • Making a Data object
  • Cell objects and optimization
  • Plotting
• Coordinate Optimization
  • Input data classes and cell functions
  • Minimizers and bounds
  • Multiprocessing and high-performance computing
  • Models and advanced usage
  • Custom minimization functions
• Processing of SMLM data
  • ThunderSTORM
  • 3D-DAOSTORM
• Indexing
• Aligning Cells
• Configuration
• Module Documentation
  • Cell
  • Data
  • Plot
  • Optimizers
  • FileIO

Indices and tables

• Index
• Module Index
• Search Page